R Module list of packages
To find what packages are installed under a specific version of R you can use the following steps:
Option 1 – Within the R prompt
Module load the version of R you want to use
Load R with the command 'R'
ip <- as.data.frame(installed.packages()[,c(1,3:4)]) rownames(ip) <- NULL ip <- ip[is.na(ip$Priority),1:2,drop=FALSE] print(ip, row.names=FALSE)
A list of packages will output to the screen
Option 2 – From the filesystem
We have provided a script that runs option 1 from the bash prompt:
rpkg <version> [pkg1] ... [pkgN]
where the version is required (e.g. 3.6.2) and the package list is optional. With no explicit packages, all of the installed packages are printed to the terminal.
If there is an R package that you wish to have installed, please send a request to rtshelp@asu.edu including the package name and R version.