Parallelism with R
This page is a work in progress, but please note that the detectCores
method from the parallel
library will not work as intended for jobs that request anything less than a full node.
For instance, R
scripts that look like this:
library(parallel)
cluster = makeCluster(detectCores())
Should be replaced with
library(parallel)
cluster = makeCluster(strtoi(system("nproc",intern=TRUE)))
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