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We have Parabricks readily available on Sol as a container, which can easily be used with apptainer. Our platform offers various methods to access it, including via the interactive command.
Process
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Interactively use Parabricks
To find the name of the container to you should use, follow the steps outlined here - https://asurc.atlassian.net/wiki/spaces/RC/pages/1904968271/Apptainer+usage#Step-1%3A-Identify-the-Apptainer-Image-for-Use
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SIMG=parabricks-4.0.sif classic-interactive -G 1 |
This command will grant you access to the Parabricks container on a physical node, with a single GPU.
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if you receive the following warning, you likely did not use the -G sbatch option to request a GPU. WARNING: Could not find any nv files on this host! |
Additional Help
If you require further assistance on this topic, please don't hesitate to contact the Research Computing Team. To create a support ticket, kindly send an email to rtshelp@asu.edu. For quick inquiries, you're welcome to reach out via our #rc-support Slack Channel or attend our office hours for live assistance
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