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The “conda install” on the above page gives the installation commands.
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The conda part in the red circle needs to be changed to mamba, and the bioconda part in the blue box is the channel name of this multiqc package. Channel is similar to the name of an online folder, that mamba can find and download the correct package. This is important for the next step.
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Open a terminal app or a command line interface on a personal laptop or pc, or in a Sol desktop session. And then type in the commands:
ssh someone@sol.asu.eduinteractive -p htc -c 4 -t 30module load mamba/latestsource activate myENVpythonimport multiqc
Step Four: What about pip?
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Almost all of the Python packages can be found on anaconda.org, and mamba is always preferred. |
Here is an example of such a special package called q2-greengenes2:
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The the commands to have this package installed to a mamba env are:
Open a terminal app or a command line interface on a personal laptop or pc, or in a Sol desktop session. And then type in the commands:
ssh someone@sol.asu.eduinteractive -p htc -c 4 -t 30module load mamba/latestsource activate myENVpip install q2-greengenes2